SNCG protein (Apteryx haastii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SNCG

Synuclein gamma. (132 aa)

Predicted Functional Partners:

TH

0.873

PSMC3

0.859

HSPA5

0.845

ENSAHAP00000004116

0.841

PSMC6

0.833

ENSAHAP00000025843

0.831

PRKN

0.822

ENSAHAP00000022317

0.822

ENSAHAP00000022329

0.822

ENSAHAP00000011895

0.821

Your Current Organism:

Apteryx haastii

NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAHAP00000004116	ENSAHAP00000022317	ENSAHAP00000004116	ENSAHAP00000022317	annotation not available	annotation not available	0.786
ENSAHAP00000004116	ENSAHAP00000022329	ENSAHAP00000004116	ENSAHAP00000022329	annotation not available	annotation not available	0.786
ENSAHAP00000004116	ENSAHAP00000025843	ENSAHAP00000004116	ENSAHAP00000025843	annotation not available	annotation not available	0.467
ENSAHAP00000004116	PRKN	ENSAHAP00000004116	ENSAHAP00000010021	annotation not available	Parkin RBR E3 ubiquitin protein ligase.	0.786
ENSAHAP00000004116	PSMC3	ENSAHAP00000004116	ENSAHAP00000025615	annotation not available	Proteasome 26S subunit, ATPase 3.	0.999
ENSAHAP00000004116	PSMC6	ENSAHAP00000004116	ENSAHAP00000018068	annotation not available	Proteasome 26S subunit, ATPase 6.	0.999
ENSAHAP00000004116	SNCG	ENSAHAP00000004116	ENSAHAP00000015499	annotation not available	Synuclein gamma.	0.841
ENSAHAP00000011895	SNCG	ENSAHAP00000011895	ENSAHAP00000015499	annotation not available	Synuclein gamma.	0.821
ENSAHAP00000022317	ENSAHAP00000004116	ENSAHAP00000022317	ENSAHAP00000004116	annotation not available	annotation not available	0.786
ENSAHAP00000022317	ENSAHAP00000025843	ENSAHAP00000022317	ENSAHAP00000025843	annotation not available	annotation not available	0.913
ENSAHAP00000022317	PSMC3	ENSAHAP00000022317	ENSAHAP00000025615	annotation not available	Proteasome 26S subunit, ATPase 3.	0.802
ENSAHAP00000022317	PSMC6	ENSAHAP00000022317	ENSAHAP00000018068	annotation not available	Proteasome 26S subunit, ATPase 6.	0.778
ENSAHAP00000022317	SNCG	ENSAHAP00000022317	ENSAHAP00000015499	annotation not available	Synuclein gamma.	0.822
ENSAHAP00000022329	ENSAHAP00000004116	ENSAHAP00000022329	ENSAHAP00000004116	annotation not available	annotation not available	0.786
ENSAHAP00000022329	ENSAHAP00000025843	ENSAHAP00000022329	ENSAHAP00000025843	annotation not available	annotation not available	0.913
ENSAHAP00000022329	PRKN	ENSAHAP00000022329	ENSAHAP00000010021	annotation not available	Parkin RBR E3 ubiquitin protein ligase.	0.868
ENSAHAP00000022329	PSMC3	ENSAHAP00000022329	ENSAHAP00000025615	annotation not available	Proteasome 26S subunit, ATPase 3.	0.802
ENSAHAP00000022329	PSMC6	ENSAHAP00000022329	ENSAHAP00000018068	annotation not available	Proteasome 26S subunit, ATPase 6.	0.778
ENSAHAP00000022329	SNCG	ENSAHAP00000022329	ENSAHAP00000015499	annotation not available	Synuclein gamma.	0.822
ENSAHAP00000025843	ENSAHAP00000004116	ENSAHAP00000025843	ENSAHAP00000004116	annotation not available	annotation not available	0.467