STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDH1Malate dehydrogenase 1. (334 aa)    
Predicted Functional Partners:
CS
Citrate synthase.
  
 0.979
FH
Fumarate hydratase.
  
 0.962
MDH2
Malate dehydrogenase 2.
   
 0.957
GOT1
Glutamic-oxaloacetic transaminase 1.
   
 0.949
GOT2
Glutamic-oxaloacetic transaminase 2.
   
 0.946
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 
 0.940
ACLY
ATP citrate lyase.
  
 0.934
UBXN7
UBX domain protein 7.
    
 0.927
ENSAHAP00000005718
annotation not available
  
 0.926
NDUFV2
NADH:ubiquinone oxidoreductase core subunit V2.
  
 0.907
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.