STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPM4Tropomyosin 4. (284 aa)    
Predicted Functional Partners:
TNNT2
Troponin T2, cardiac type.
   
 0.911
TNNI1
Troponin I1, slow skeletal type.
   
 0.901
MYL1
Myosin light chain 1.
   
 0.897
TNNT3
Troponin T3, fast skeletal type.
   
 0.876
TNNI2
Troponin I2, fast skeletal type.
   
 0.871
SMIM20
Small integral membrane protein 20.
   
 0.855
ENSAHAP00000017676
annotation not available
   
 0.839
ENSAHAP00000026163
annotation not available
   
 0.830
TNNC1
Troponin C1, slow skeletal and cardiac type.
   
 0.797
MYL3
Myosin light chain 3.
   
 0.794
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.