STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMAT3Zinc finger matrin-type 3. (324 aa)    
Predicted Functional Partners:
RSPH4A
Radial spoke head component 4A.
   
    0.491
DNAI1
Dynein axonemal intermediate chain 1.
   
    0.491
MITD1
Microtubule interacting and trafficking domain containing 1.
   
    0.422
ENSAHAP00000012510
annotation not available
   
    0.406
ENSAHAP00000000519
annotation not available
   
    0.404
MAOA
Monoamine oxidase A.
   
    0.404
ENSAHAP00000016502
annotation not available
   
    0.404
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.