STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCMT1protein-L-isoaspartate (D-aspartate) O-methyltransferase. (231 aa)    
Predicted Functional Partners:
TMBIM6
Transmembrane BAX inhibitor motif containing 6.
      
 0.550
RAN
RAN, member RAS oncogene family.
   
  
 0.539
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
     
 0.460
DHX15
DEAH-box helicase 15.
 
 
   0.455
ENSAHAP00000006702
annotation not available
  
  
 0.442
NUS1
NUS1 dehydrodolichyl diphosphate synthase subunit.
     
 0.442
BORCS5
BLOC-1 related complex subunit 5.
   
  
 0.436
RPIA
Ribose 5-phosphate isomerase A.
   
   0.431
TMEM183A
Transmembrane protein 183A.
      
 0.431
TTC7B
Tetratricopeptide repeat domain 7B.
      
 0.430
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.