STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C18orf21Chromosome 18 open reading frame 21. (221 aa)    
Predicted Functional Partners:
RPP25
Ribonuclease P and MRP subunit p25.
   
   0.655
POP4
POP4 homolog, ribonuclease P/MRP subunit.
   
   0.635
RPP25L
Ribonuclease P/MRP subunit p25 like.
   
   0.580
POP5
POP5 homolog, ribonuclease P/MRP subunit.
    
   0.566
RPP38
Ribonuclease P/MRP subunit p38.
   
   0.546
RPP30
Ribonuclease P/MRP subunit p30.
   
   0.497
RPRD1A
Regulation of nuclear pre-mRNA domain containing 1A.
      
 0.463
RNF41
Ring finger protein 41.
      
 0.454
ENSAHAP00000003042
annotation not available
    
   0.448
STK17B
Serine/threonine kinase 17b.
      
 0.432
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.