STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM71Tripartite motif containing 71. (690 aa)    
Predicted Functional Partners:
AGO2
Argonaute RISC catalytic component 2.
    
 0.694
ENSAHAP00000026137
annotation not available
    
  0.683
ENSAHAP00000015435
annotation not available
    
 0.602
ENSAHAP00000019394
annotation not available
    
 0.602
ENSAHAP00000020988
annotation not available
    
 0.595
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.555
ENSAHAP00000023833
annotation not available
    
 0.542
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.535
ENSAHAP00000004948
annotation not available
    
 0.521
ENSAHAP00000006616
annotation not available
    
 0.519
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.