METTL15 protein (Apteryx haastii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

METTL15

Methyltransferase like 15. (517 aa)

Predicted Functional Partners:

DAP3

0.923

RBFA

0.895

MRPS10

0.872

MRPS6

0.868

MRPS5

0.867

MRPS9

0.866

MRPS7

0.866

ENSAHAP00000007117

0.860

MRPS2

0.856

MRPS16

0.831

Your Current Organism:

Apteryx haastii

NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DAP3	ENSAHAP00000007117	ENSAHAP00000028388	ENSAHAP00000007117	Death associated protein 3.	annotation not available	0.999
DAP3	METTL15	ENSAHAP00000028388	ENSAHAP00000022837	Death associated protein 3.	Methyltransferase like 15.	0.923
DAP3	MRPS10	ENSAHAP00000028388	ENSAHAP00000005749	Death associated protein 3.	Mitochondrial ribosomal protein S10.	0.999
DAP3	MRPS16	ENSAHAP00000028388	ENSAHAP00000021360	Death associated protein 3.	Mitochondrial ribosomal protein S16.	0.999
DAP3	MRPS2	ENSAHAP00000028388	ENSAHAP00000011602	Death associated protein 3.	Mitochondrial ribosomal protein S2.	0.997
DAP3	MRPS5	ENSAHAP00000028388	ENSAHAP00000008254	Death associated protein 3.	Mitochondrial ribosomal protein S5.	0.999
DAP3	MRPS6	ENSAHAP00000028388	ENSAHAP00000026578	Death associated protein 3.	Mitochondrial ribosomal protein S6.	0.999
DAP3	MRPS7	ENSAHAP00000028388	ENSAHAP00000022652	Death associated protein 3.	Mitochondrial ribosomal protein S7.	0.999
DAP3	MRPS9	ENSAHAP00000028388	ENSAHAP00000005242	Death associated protein 3.	Mitochondrial ribosomal protein S9.	0.999
DAP3	RBFA	ENSAHAP00000028388	ENSAHAP00000012470	Death associated protein 3.	Ribosome binding factor A.	0.782
ENSAHAP00000007117	DAP3	ENSAHAP00000007117	ENSAHAP00000028388	annotation not available	Death associated protein 3.	0.999
ENSAHAP00000007117	METTL15	ENSAHAP00000007117	ENSAHAP00000022837	annotation not available	Methyltransferase like 15.	0.860
ENSAHAP00000007117	MRPS10	ENSAHAP00000007117	ENSAHAP00000005749	annotation not available	Mitochondrial ribosomal protein S10.	0.999
ENSAHAP00000007117	MRPS16	ENSAHAP00000007117	ENSAHAP00000021360	annotation not available	Mitochondrial ribosomal protein S16.	0.999
ENSAHAP00000007117	MRPS2	ENSAHAP00000007117	ENSAHAP00000011602	annotation not available	Mitochondrial ribosomal protein S2.	0.999
ENSAHAP00000007117	MRPS5	ENSAHAP00000007117	ENSAHAP00000008254	annotation not available	Mitochondrial ribosomal protein S5.	0.999
ENSAHAP00000007117	MRPS6	ENSAHAP00000007117	ENSAHAP00000026578	annotation not available	Mitochondrial ribosomal protein S6.	0.999
ENSAHAP00000007117	MRPS7	ENSAHAP00000007117	ENSAHAP00000022652	annotation not available	Mitochondrial ribosomal protein S7.	0.999
ENSAHAP00000007117	MRPS9	ENSAHAP00000007117	ENSAHAP00000005242	annotation not available	Mitochondrial ribosomal protein S9.	0.999
ENSAHAP00000007117	RBFA	ENSAHAP00000007117	ENSAHAP00000012470	annotation not available	Ribosome binding factor A.	0.886