STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC3HC1Zinc finger C3HC-type containing 1. (387 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1.
    
 0.839
RBX1
Ring-box 1.
    
 0.736
CUL1
Cullin 1.
    
  0.710
WRN
WRN RecQ like helicase.
      
 0.579
CUL3
Cullin 3.
    
  0.574
RNF7
Ring finger protein 7.
    
 0.550
CCNB2
Cyclin B2.
   
 
 0.542
CACUL1
CDK2 associated cullin domain 1.
    
  0.540
GPN1
GPN-loop GTPase 1.
   
    0.538
CCNB1
Cyclin B1.
   
 
 0.527
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.