STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARL8BADP ribosylation factor like GTPase 8B. (186 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
    
 0.906
ITSN1
Intersectin 1.
    
 0.879
ENSAHAP00000019873
annotation not available
    
  0.809
ENSAHAP00000005268
annotation not available
   
 0.747
SHANK3
SH3 and multiple ankyrin repeat domains 3.
   
 0.747
MYO9A
Myosin IXA.
    
 0.723
MYO9B
Myosin IXB.
    
 0.723
TRIO
Trio Rho guanine nucleotide exchange factor.
   
 0.717
DOCK4
Dedicator of cytokinesis 4.
    
 0.717
ENSAHAP00000028037
annotation not available
   
 0.717
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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