STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW73590.13-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100); COG: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Pfam: short chain dehydrogenase::PF00106. (259 aa)    
Predicted Functional Partners:
CBW73589.1
Sensor protein luxQ (EC 2.7.3.-); COG: Signal transduction histidine kinase; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase::PF02518<br>His Kinase A (phosphoacceptor) domain::PF00512<br>Response regulator receiver domain::PF00072.
   
 
 0.793
CBW73588.1
SULFITE-DEHYDROGENASE; COG: Uncharacterized protein conserved in bacteria.
       0.773
CBW74737.1
Gluconate 5-dehydrogenase (EC 1.1.1.69); COG: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Pfam: KR domain::PF08659<br>short chain dehydrogenase::PF00106.
  
     0.762
CBW75576.1
Non-ribosomal peptide synthetase modules; COG: Non-ribosomal peptide synthetase modules and related proteins; Pfam: AMP-binding enzyme::PF00501<br>Condensation domain::PF00668<br>Phosphopantetheine attachment site::PF00550<br>Thioesterase domain::PF00975.
  
 
 0.741
CBW75453.1
Non-ribosomal peptide synthetase modules (EC 6.3.2.-); COG: Non-ribosomal peptide synthetase modules and related proteins; Pfam: AMP-binding enzyme::PF00501<br>Condensation domain::PF00668<br>Phosphopantetheine attachment site::PF00550.
  
 
 0.673
CBW76229.1
Oxidoreductase (EC 1.1.1.-); COG: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Pfam: short chain dehydrogenase::PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.654
rhiA
Modular polyketide synthase (EC 2.3.1.-); Rhizoxin biosynthesis.
  
 0.638
CBW73587.1
Unnamed protein product.
       0.543
CBW75707.1
Short chain dehydrogenase (EC 1.-.-.-); COG: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Pfam: short chain dehydrogenase::PF00106.
  
     0.449
CBW74782.1
Short chain dehydrogenase (EC 1.-.-.-); COG: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Pfam: short chain dehydrogenase::PF00106.
  
     0.445
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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