STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW73824.1Phenylacetic acid degradation protein paaA; COG: Uncharacterized conserved protein; Pfam: Phenylacetic acid catabolic protein::PF05138. (332 aa)    
Predicted Functional Partners:
CBW73822.1
Phenylacetic acid degradation protein paaC; COG: Uncharacterized conserved protein; Pfam: Phenylacetic acid catabolic protein::PF05138.
 0.999
CBW73823.1
Phenylacetic acid degradation protein paaB; COG: Uncharacterized enzyme of phenylacetate metabolism; Pfam: Phenylacetic acid degradation B::PF06243.
 0.999
CBW73821.1
Phenylacetic acid degradation protein paaD; COG: Predicted metal-sulfur cluster biosynthetic enzyme; Pfam: Domain of unknown function DUF59::PF01883.
 
 
 0.997
CBW73820.1
Phenylacetyl-CoA 2-monooxygenase electron transfer component (EC 1.14.13-); COG: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Pfam: Oxidoreductase FAD-binding domain::PF00970<br>2Fe-2S iron-sulfur cluster binding domain::PF00111<br>Oxidoreductase NAD-binding domain::PF00175.
 
 0.996
CBW74706.1
Phenylacetic acid degradation protein paaI; COG: Uncharacterized protein, possibly involved in aromatic compounds catabolism; Pfam: Thioesterase superfamily::PF03061.
 
 
 0.982
CBW74707.1
Enoyl-CoA hydratase (EC 4.2.1.17); COG: Enoyl-CoA hydratase/carnithine racemase; Pfam: Enoyl-CoA hydratase/isomerase family::PF00378.
 
 
 0.963
CBW74705.1
Coenzyme F390 Synthetase / Phenylacetate-coenzyme A ligase (EC 6.2.1.30); Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.939
CBW76218.1
Enoyl-CoA hydratase (EC 4.2.1.17); COG: Enoyl-CoA hydratase/carnithine racemase; Pfam: Enoyl-CoA hydratase/isomerase family::PF00378; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.566
CBW75642.1
Enoyl-CoA hydratase (EC 4.2.1.17); COG: Enoyl-CoA hydratase/carnithine racemase; Pfam: Enoyl-CoA hydratase/isomerase family::PF00378; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.566
CBW73817.1
Transcriptional regulator, TetR family; COG: Transcriptional regulator; Pfam: Bacterial regulatory proteins, tetR family::PF00440.
 
     0.432
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.