STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW73718.1Baseplate assembly protein W; COG: Phage baseplate assembly protein W; Pfam: Gene 25-like lysozyme::PF04965. (123 aa)    
Predicted Functional Partners:
CBW73716.1
Tail protein I; COG: Bacteriophage P2-related tail formation protein; Pfam: Phage tail protein (Tail_P2_I)::PF09684.
 
 
 0.993
CBW73717.1
Baseplate assembly protein J; COG: Phage-related baseplate assembly protein; Pfam: Baseplate J-like protein::PF04865.
 
 
 0.993
CBW73713.1
Phage TAIL SHEATH PROTEIN; COG: Phage tail sheath protein FI; Pfam: Phage tail sheath protein::PF04984.
 
   0.983
CBW73719.1
Baseplate assembly protein V; COG: Phage P2 baseplate assembly protein gpV; Pfam: Phage-related baseplate assembly protein::PF04717.
 
 
 0.982
CBW73708.1
Phage tail protein; COG: Phage protein U; Pfam: Phage P2 GpU::PF06995.
 
 
 0.981
CBW73712.1
Phage major tail protein; COG: Phage tail tube protein FII; Pfam: Phage tail tube protein FII::PF04985.
 
   0.981
CBW73707.1
Gene D protein; COG: Phage protein D; Pfam: Phage late control gene D protein (GPD)::PF05954.
 
 
 0.979
CBW73734.1
Tail protein X; COG: P2-like prophage tail protein X; Pfam: Phage Tail Protein X::PF05489.
 
   0.970
CBW73715.1
PHAGE TAIL PROTEIN; COG: Phage-related protein.
 
     0.913
CBW73709.1
Phage tail protein; COG: Phage protein U.
 
    0.886
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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