STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW74389.1Transcriptional regulator, AsnC family; COG: Transcriptional regulators; Pfam: AsnC family::PF01037. (162 aa)    
Predicted Functional Partners:
CBW74388.1
Glutaryl-CoA dehydrogenase (EC 1.3.99.7); COG: Acyl-CoA dehydrogenases.
       0.532
CBW73681.1
Proline dehydrogenase (EC 1.5.99.8) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12); Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.516
CBW74610.1
Glutamate synthase [NADPH] large chain (EC 1.4.1.13); COG: Glutamate synthase domain 1; Pfam: Glutamine amidotransferases class-II::PF00310<br>GXGXG motif::PF01493<br>Glutamate synthase central domain::PF04898<br>Conserved region in glutamate synthase::PF01645.
     
 0.496
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.