STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW74507.1NAD(FAD)-utilizing dehydrogenases; COG: Predicted flavoproteins; Pfam: HI0933-like protein::PF03486. (407 aa)    
Predicted Functional Partners:
CBW73611.1
ADA regulatory protein / O6-methylguanine-DNA methyltransferase (EC 2.1.1.63); COG: Adenosine deaminase; Pfam: Metal binding domain of Ada::PF02805<br>6-O-methylguanine DNA methyltransferase, DNA binding domain::PF01035<br>Bacterial regulatory helix-turn-helix proteins, AraC family::PF00165<br>6-O-methylguanine DNA methyltransferase, ribonuclease-like domain::PF02870.
 
     0.750
tsaD
O-sialoglycoprotein endopeptidase (EC 3.4.24.57); Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
       0.554
rpsU-2
SSU ribosomal protein S21P; COG: Ribosomal protein S21; Pfam: Ribosomal protein S21::PF01165; Belongs to the bacterial ribosomal protein bS21 family.
       0.538
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.