STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW74493.13-isopropylmalate dehydrogenase (EC 1.1.1.85); COG: Predicted Rossmann fold nucleotide-binding protein; Pfam: Possible lysine decarboxylase::PF03641; Belongs to the LOG family. (259 aa)    
Predicted Functional Partners:
polA
DNA polymerase I (EC 2.7.7.7); In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.642
CBW74495.1
NADH dehydrogenase (EC 1.6.99.3); COG: NADH dehydrogenase, FAD-containing subunit; Pfam: Pyridine nucleotide-disulphide oxidoreductase::PF00070<br>Pyridine nucleotide-disulphide oxidoreductase::PF07992.
       0.429
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.