STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW74457.1Unnamed protein product; COG: Uncharacterized protein conserved in bacteria. (165 aa)    
Predicted Functional Partners:
CBW74460.1
Unnamed protein product.
       0.782
CBW74458.1
Unnamed protein product.
       0.778
CBW74459.1
Unnamed protein product.
       0.777
CBW74461.1
Unnamed protein product.
       0.711
CBW74462.1
Unnamed protein product.
       0.708
CBW75565.1
Unnamed protein product.
  
    0.685
CBW73728.1
Tail completion protein R; COG: Phage P2 baseplate assembly protein gpV.
  
    0.665
CBW74456.1
Unnamed protein product.
       0.648
CBW74455.1
Unnamed protein product.
       0.645
CBW74451.1
Phage_Mu_F domain-containing protein; Unnamed protein product; COG: Uncharacterized protein, homolog of phage Mu protein gp30; Pfam: Phage Mu protein F like protein::PF04233.
  
  
 0.641
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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