STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW75240.1Unnamed protein product. (294 aa)    
Predicted Functional Partners:
CBW75148.1
Unnamed protein product; COG: FOG: CheY-like receiver; Pfam: Response regulator receiver domain::PF00072.
  
 
 0.999
CBW74763.1
Sensory transduction protein kinase (EC 2.7.3.-); COG: FOG: PAS/PAC domain; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase::PF02518<br>His Kinase A (phosphoacceptor) domain::PF00512<br>PAS fold::PF00989<br>PAS fold::PF08448<br>Response regulator receiver domain::PF00072.
  
 
 0.995
CBW74943.1
Limited host range virA protein (EC 2.7.3.-); COG: Signal transduction histidine kinase; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase::PF02518<br>Response regulator receiver domain::PF00072.
  
 
 0.993
CBW75409.1
Chemotaxis motB protein; COG: Flagellar motor protein; Pfam: OmpA family::PF00691.
  
  
 0.965
CBW75505.1
Sensor protein fixL (EC 2.7.3.-); COG: FOG: PAS/PAC domain; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase::PF02518<br>His Kinase A (phosphoacceptor) domain::PF00512<br>PAS fold::PF00989<br>PAS fold::PF08447<br>PAS fold::PF08448.
  
 
 0.875
CBW73589.1
Sensor protein luxQ (EC 2.7.3.-); COG: Signal transduction histidine kinase; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase::PF02518<br>His Kinase A (phosphoacceptor) domain::PF00512<br>Response regulator receiver domain::PF00072.
  
 
 0.853
CBW75313.1
Sensory transduction protein kinase (EC 2.7.3.-); COG: Signal transduction histidine kinase; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase::PF02518<br>His Kinase A (phosphoacceptor) domain::PF00512<br>PAS fold::PF08447<br>Response regulator receiver domain::PF00072.
  
 
 0.853
CBW75778.1
Sensor protein (EC 2.7.3.-); COG: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; Pfam: EAL domain::PF00563<br>GGDEF domain::PF00990.
  
  
 0.786
rhiA
Modular polyketide synthase (EC 2.3.1.-); Rhizoxin biosynthesis.
  
 
 0.720
rhiD
Modular polyketide synthase (EC 2.3.1.-); Rhizoxin biosynthesis.
   
 
 0.709
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.