STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW75916.1Manganese transport system ATP-binding protein; COG: ABC-type Mn/Zn transport systems, ATPase component; Pfam: ABC transporter::PF00005. (315 aa)    
Predicted Functional Partners:
CBW75917.1
Manganese transport system membrane protein; COG: ABC-type Mn2+/Zn2+ transport systems, permease components; Pfam: ABC 3 transport family::PF00950.
 
 0.999
CBW75915.1
Manganese-binding protein; COG: ABC-type metal ion transport system, periplasmic component/surface adhesin; Pfam: Periplasmic solute binding protein family::PF01297; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.997
CBW76307.1
Dipeptide transport ATP-binding protein dppD; COG: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Pfam: ABC transporter::PF00005<br>Oligopeptide/dipeptide transporter, C-terminal region::PF08352; Belongs to the ABC transporter superfamily.
 
   
0.885
ubiB
2-polyprenylphenol 6-hydroxylase accessory protein ubiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.
      0.589
CBW75914.1
ABC transporter ATP-binding protein; COG: ABC-type multidrug transport system, ATPase component; Pfam: ABC transporter::PF00005.
 
   
0.573
fur
Ferric uptake regulation protein; COG: Fe2+/Zn2+ uptake regulation proteins; Pfam: Ferric uptake regulator family::PF01475; Belongs to the Fur family.
  
  
 0.564
CBW75913.1
ABC transporter permease protein; COG: ABC-type multidrug transport system, permease component; Pfam: ABC-2 type transporter::PF01061.
       0.548
CBW75148.1
Unnamed protein product; COG: FOG: CheY-like receiver; Pfam: Response regulator receiver domain::PF00072.
     
 0.516
CBW75897.1
Hypothetical protein.
 
    0.515
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.