STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW75923.1AcrAB operon repressor; COG: Transcriptional regulator; Pfam: MAATS-type transcriptional repressor, C-terminal region::PF08361<br>Bacterial regulatory proteins, tetR family::PF00440. (238 aa)    
Predicted Functional Partners:
CBW75922.1
Acriflavin resistance periplasmic protein; COG: Membrane-fusion protein; Pfam: HlyD family secretion protein::PF00529; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   
 0.483
CBW75921.1
Acriflavin resistance plasma membrane protein; COG: Cation/multidrug efflux pump; Pfam: AcrB/AcrD/AcrF family::PF00873.
 
   
 0.450
CBW75453.1
Non-ribosomal peptide synthetase modules (EC 6.3.2.-); COG: Non-ribosomal peptide synthetase modules and related proteins; Pfam: AMP-binding enzyme::PF00501<br>Condensation domain::PF00668<br>Phosphopantetheine attachment site::PF00550.
     
 0.434
CBW75576.1
Non-ribosomal peptide synthetase modules; COG: Non-ribosomal peptide synthetase modules and related proteins; Pfam: AMP-binding enzyme::PF00501<br>Condensation domain::PF00668<br>Phosphopantetheine attachment site::PF00550<br>Thioesterase domain::PF00975.
     
 0.415
CBW75148.1
Unnamed protein product; COG: FOG: CheY-like receiver; Pfam: Response regulator receiver domain::PF00072.
    
 
 0.411
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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