STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW75767.1DNA polymerase III alpha subunit (EC 2.7.7.7); COG: DNA polymerase III, alpha subunit; Belongs to the DNA polymerase type-C family. DnaE2 subfamily. (262 aa)    
Predicted Functional Partners:
CBW75766.1
DNA polymerase III alpha subunit (EC 2.7.7.7); COG: DNA polymerase III, alpha subunit; Pfam: OB-fold nucleic acid binding domain::PF01336.
     0.994
CBW75768.1
DNA polymerase III alpha subunit (EC 2.7.7.7); Belongs to the DNA polymerase type-C family. DnaE2 subfamily.
 
     0.946
CBW75163.1
DNA polymerase III, delta' subunit (EC 2.7.7.7); COG: ATPase involved in DNA replication.
  
 
 
 0.591
CBW75765.1
Unnamed protein product.
       0.586
CBW75769.1
Hypothetical protein; COG: Phage baseplate assembly protein W.
       0.560
CBW75770.1
DNA binding protein; COG: Predicted transcriptional regulators.
       0.560
CBW73918.1
DNA polymerase III, delta subunit (EC 2.7.7.7); COG: DNA polymerase III, delta subunit; Pfam: DNA polymerase III, delta subunit::PF06144.
   
 
 0.558
CBW74853.1
DNA polymerase III subunit gamma/tau (EC 2.7.7.7); COG: DNA polymerase III, gamma/tau subunits; Pfam: ATPase family associated with various cellular activities (AAA)::PF00004.
  
 
 0.549
CBW75227.1
Uracil DNA glycosylase superfamily protein; COG: Uracil-DNA glycosylase; Pfam: Uracil DNA glycosylase superfamily::PF03167.
      0.542
dnaQ
DNA polymerase III, epsilon chain (EC 2.7.7.7); DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.
   
 
 0.539
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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