STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW75804.1Unnamed protein product. (39 aa)    
Predicted Functional Partners:
CBW75805.1
Unnamed protein product.
       0.773
CBW75801.1
ABC transporter ATP-binding protein; COG: ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; Pfam: ABC transporter::PF00005.
       0.521
CBW75803.1
ABC transporter permease protein; COG: ABC-type anion transport system, duplicated permease component.
       0.521
CBW75802.1
ABC transporter permease protein; COG: ABC-type anion transport system, duplicated permease component; Pfam: Binding-protein-dependent transport system inner membrane component::PF00528.
       0.521
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.