STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wbxAGlycosyltransferase. (274 aa)    
Predicted Functional Partners:
wzx
Oligosaccharide translocase (flippase); COG: Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.899
galE
UDP-glucose 4-epimerase (EC 5.1.3.2); COG: UDP-glucose 4-epimerase; Pfam: NAD dependent epimerase/dehydratase family::PF01370; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
       0.770
wecA
Undecaprenyl-phosphate alpha-N-acetylglucosaminephosphotransferase.
  
    0.690
CBW75370.1
Oligosaccharide translocase (flippase); COG: Membrane protein involved in the export of O-antigen and teichoic acid; Pfam: Polysaccharide biosynthesis protein::PF01943.
 
  
 0.577
CBW75307.1
Phage shock protein A; COG: Phage shock protein A (IM30), suppresses sigma54-dependent transcription; Pfam: PspA/IM30 family::PF04012.
  
     0.564
CBW75930.1
Esterase (EC 3.1.1.1); COG: Phospholipase/lecithinase/hemolysin.
  
     0.545
CBW75949.1
O-antigen ligase; COG: Lipid A core - O-antigen ligase and related enzymes; Pfam: O-Antigen Polymerase::PF04932.
 
  
 0.487
CBW76068.1
Unnamed protein product; COG: Predicted membrane protein; Pfam: Conserved nitrate reductase-associated protein (Nitr_red_assoc)::PF09655.
  
     0.481
manB
Phosphomannomutase.
  
  
 0.479
CBW75378.1
Hypothetical protein; COG: Predicted transcriptional regulators; Pfam: Domain of unknown function (DUF1992)::PF09350.
  
     0.476
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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