STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW75857.1Putative response regulator; ORF8. (122 aa)    
Predicted Functional Partners:
CBW74763.1
Sensory transduction protein kinase (EC 2.7.3.-); COG: FOG: PAS/PAC domain; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase::PF02518<br>His Kinase A (phosphoacceptor) domain::PF00512<br>PAS fold::PF00989<br>PAS fold::PF08448<br>Response regulator receiver domain::PF00072.
  
 
 0.902
CBW75148.1
Unnamed protein product; COG: FOG: CheY-like receiver; Pfam: Response regulator receiver domain::PF00072.
 
 
 0.888
CBW75806.1
Osmolarity sensor protein envZ (EC 2.7.3.-); COG: Signal transduction histidine kinase; Pfam: HAMP domain::PF00672<br>Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase::PF02518<br>His Kinase A (phosphoacceptor) domain::PF00512.
 
 
 0.550
CBW73647.1
Transcriptional regulatory protein; COG: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Pfam: Response regulator receiver domain::PF00072<br>Transcriptional regulatory protein, C terminal::PF00486.
  
     0.520
CBW74943.1
Limited host range virA protein (EC 2.7.3.-); COG: Signal transduction histidine kinase; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase::PF02518<br>Response regulator receiver domain::PF00072.
  
 
 0.517
CBW73646.1
Two component system histidine kinase (EC 2.7.3.-); COG: Signal transduction histidine kinase; Pfam: Two-component sensor kinase N-terminal::PF08521<br>HAMP domain::PF00672<br>Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase::PF02518<br>His Kinase A (phosphoacceptor) domain::PF00512.
 
 
 0.503
CBW75240.1
Unnamed protein product.
  
 
 0.498
CBW73589.1
Sensor protein luxQ (EC 2.7.3.-); COG: Signal transduction histidine kinase; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase::PF02518<br>His Kinase A (phosphoacceptor) domain::PF00512<br>Response regulator receiver domain::PF00072.
 
 
 0.473
CBW75927.1
Transcriptional regulatory protein qseB; COG: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Pfam: Response regulator receiver domain::PF00072<br>Transcriptional regulatory protein, C terminal::PF00486.
  
     0.459
CBW75217.1
Osmolarity sensor protein envZ (EC 2.7.3.-); COG: Signal transduction histidine kinase; Pfam: HAMP domain::PF00672<br>Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase::PF02518<br>His Kinase A (phosphoacceptor) domain::PF00512.
 
 
 0.457
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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