STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW74272.1Na+ driven multidrug efflux pump; COG: Na+-driven multidrug efflux pump; Pfam: MatE::PF01554. (468 aa)    
Predicted Functional Partners:
CBW74233.1
SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
   
    0.531
CBW75213.1
Phytoene synthase (EC 2.5.1.32); COG: Phytoene/squalene synthetase; Pfam: Squalene/phytoene synthase::PF00494.
   
   0.525
CBW75379.1
Farnesyl-diphosphate farnesyltransferase (EC 2.5.1.21); COG: Phytoene/squalene synthetase; Pfam: Squalene/phytoene synthase::PF00494.
   
   0.525
CBW74273.1
Unnamed protein product.
       0.491
CBW74274.1
Unnamed protein product.
       0.491
fumC
Aldose 1-dehydrogenase (EC 1.1.1.121) / Fumarate hydratase class II (EC 4.2.1.2); Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
       0.484
CBW74271.1
Cardiolipin synthetase (EC 2.7.8.-); COG: Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi nsynthases and related enzymes; Pfam: Phospholipase D Active site motif::PF00614.
       0.484
macB
Macrolide-specific ABC-type efflux carrier; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
  
 0.444
CBW73911.1
Glyceraldehyde 3-phosphate dehydrogenase (EC 1.2.1.12); COG: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Pfam: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain::PF02800.
   
    0.405
CBW73910.1
Glyceraldehyde 3-phosphate dehydrogenase (EC 1.2.1.12); COG: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Pfam: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain::PF00044; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
    0.405
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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