STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW73787.1ABC transporter ATP-binding protein; COG: ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components; Pfam: ABC transporter transmembrane region::PF00664<br>ABC transporter::PF00005. (743 aa)    
Predicted Functional Partners:
CBW73786.1
Unnamed protein product.
       0.497
msbA
Phospholipid-lipopolysaccharide ABC transporter; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
  
 
 
0.418
CBW74687.1
Multidrug resistance ABC transporter ATP-binding and permease protein; COG: ABC-type multidrug transport system, ATPase and permease components; Pfam: ABC transporter transmembrane region::PF00664<br>ABC transporter::PF00005.
  
 
 
0.405
CBW74337.1
Multidrug resistance ABC transporter ATP-binding and permease protein; COG: ABC-type multidrug transport system, ATPase and permease components; Pfam: ABC transporter::PF00005.
  
 
 
0.402
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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