STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW76065.1Nitrite extrusion protein. (68 aa)    
Predicted Functional Partners:
CBW76066.1
Acyl-CoA hydrolase (EC 3.1.2.20); COG: Acyl-CoA hydrolase; Pfam: Thioesterase superfamily::PF03061.
       0.520
CBW76064.1
HTH lysR-type domain-containing protein; Unnamed protein product; COG: Transcriptional regulator; Pfam: Bacterial regulatory helix-turn-helix protein, lysR family::PF00126<br>LysR substrate binding domain::PF03466.
  
    0.480
CBW76169.1
Cytochrome c oxidase polypeptide II (EC 1.9.3.1); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
     
 0.439
CBW75576.1
Non-ribosomal peptide synthetase modules; COG: Non-ribosomal peptide synthetase modules and related proteins; Pfam: AMP-binding enzyme::PF00501<br>Condensation domain::PF00668<br>Phosphopantetheine attachment site::PF00550<br>Thioesterase domain::PF00975.
  
  
 0.406
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.