STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW76084.1Hypothetical protein; COG: Uncharacterized protein conserved in bacteria. (367 aa)    
Predicted Functional Partners:
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase ubiE (EC 2.1.1.-); Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
       0.795
CBW76086.1
Hypothetical protein; COG: Uncharacterized protein conserved in bacteria; Pfam: Protein of unknown function (DUF971)::PF06155.
       0.795
CBW76088.1
Anaerobic glycerol-3-phosphate dehydrogenase membrane anchor subunit (EC 1.1.5.3); COG: Fe-S oxidoreductase; Pfam: FAD linked oxidases, C-terminal domain::PF02913<br>FAD binding domain::PF01565.
       0.736
CBW76087.1
HIT family hydrolase; COG: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; Pfam: HIT domain::PF01230.
       0.733
CBW76083.1
Hypothetical protein; COG: Uncharacterized protein conserved in bacteria.
 
     0.625
ubiB
2-polyprenylphenol 6-hydroxylase accessory protein ubiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.
       0.565
CBW76225.1
Unnamed protein product; COG: Arginyl-tRNA synthetase; Pfam: Domain of unknown function (DUF1840)::PF08895.
  
     0.537
queF
Queuosine biosynthesis protein QueF; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
 
     0.528
CBW75186.1
Intracellular septation protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
  
    0.518
CBW76089.1
Glyco_hydro_64 domain-containing protein; Unnamed protein product.
       0.482
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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