STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW76158.1ABC transporter substrate-binding protein; COG: ABC-type metal ion transport system, periplasmic component/surface antigen; Pfam: NLPA lipoprotein::PF03180; Belongs to the nlpA lipoprotein family. (280 aa)    
Predicted Functional Partners:
CBW74245.1
ABC transporter permease protein; COG: ABC-type metal ion transport system, permease component; Pfam: Binding-protein-dependent transport system inner membrane component::PF00528.
 0.998
metN
ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 0.992
CBW74246.1
ABC transporter substrate-binding protein; COG: ABC-type metal ion transport system, periplasmic component/surface antigen; Pfam: NLPA lipoprotein::PF03180.
  
  
 
0.902
CBW76156.1
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25); COG: N-acetylglucosamine-6-phosphate deacetylase.
  
    0.772
CBW76157.1
Unnamed protein product.
       0.768
CBW76154.1
Unnamed protein product.
       0.618
CBW76155.1
Unnamed protein product.
       0.618
CBW76161.1
Heme O monooxygenase (ferredoxin) (EC 1.14.15.-); COG: Uncharacterized protein required for cytochrome oxidase assembly; Pfam: Cytochrome oxidase assembly protein::PF02628.
       0.552
ctaB
Protoheme IX farnesyltransferase (EC 2.5.1.-); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
  
    0.545
CBW76159.1
SCO2 PROTEIN PRECURSOR; COG: Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems; Pfam: AhpC/TSA family::PF00578<br>SCO1/SenC::PF02630.
       0.542
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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