STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW74645.1NIF3-related protein; COG: Uncharacterized conserved protein; Pfam: NIF3 (NGG1p interacting factor 3)::PF01784. (248 aa)    
Predicted Functional Partners:
CBW76299.1
Regulator of kinase autophosphorylation inhibitor; COG: Allophanate hydrolase subunit 2; Pfam: Allophanate hydrolase subunit 2::PF02626.
 
    0.868
CBW76298.1
Kinase autophosphorylation inhibitor kipI; COG: Allophanate hydrolase subunit 1; Pfam: Allophanate hydrolase subunit 1::PF02682.
 
    0.794
pxpA
Lactam utilization protein LAMB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
    
 0.743
CBW74644.1
Endopeptidase degP (EC 3.4.21.-); COG: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Pfam: PDZ domain (Also known as DHR or GLGF)::PF00595<br>Trypsin::PF00089; Belongs to the peptidase S1C family.
  
    0.592
metG
Methionyl-tRNA synthetase (EC 6.1.1.10); Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
  
 0.421
rmlB
dTDP-glucose 4,6-dehydratase (EC 4.2.1.46); COG: dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
    0.400
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.