STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW74674.1Amino acid permease; COG: Amino acid transporters; Pfam: Amino acid permease::PF00324. (538 aa)    
Predicted Functional Partners:
CBW74673.1
Unnamed protein product.
       0.562
CBW75453.1
Non-ribosomal peptide synthetase modules (EC 6.3.2.-); COG: Non-ribosomal peptide synthetase modules and related proteins; Pfam: AMP-binding enzyme::PF00501<br>Condensation domain::PF00668<br>Phosphopantetheine attachment site::PF00550.
  
 
 0.507
CBW74229.1
Chorismate mutase (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51); COG: Prephenate dehydratase; Pfam: ACT domain::PF01842<br>Chorismate mutase type II::PF01817<br>Prephenate dehydratase::PF00800.
   
 
 0.435
CBW75405.1
Puromycin-sensitive aminopeptidase (EC 3.4.11.-); COG: Aminopeptidase N; Pfam: Peptidase family M1::PF01433.
  
     0.419
CBW74610.1
Glutamate synthase [NADPH] large chain (EC 1.4.1.13); COG: Glutamate synthase domain 1; Pfam: Glutamine amidotransferases class-II::PF00310<br>GXGXG motif::PF01493<br>Glutamate synthase central domain::PF04898<br>Conserved region in glutamate synthase::PF01645.
  
  
 0.402
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.