STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW75655.1Hypothetical protein; COG: Uncharacterized conserved protein; Pfam: F420-0:Gamma-glutamyl ligase::PF01996. (270 aa)    
Predicted Functional Partners:
CBW75652.1
LPPG domain, 2-phospho-L-lactate transferase (EC 2.7.8.-); COG: Uncharacterized conserved protein; Pfam: Uncharacterised protein family UPF0052::PF01933.
 
 
 0.990
CBW75654.1
Unnamed protein product; COG: Uncharacterized conserved protein; Pfam: Protein of unknown function DUF121::PF01983.
 
   
 0.917
CBW75653.1
FO synthase (EC 2.5.1.-); COG: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes; Pfam: Radical SAM superfamily::PF04055.
 
   
 0.912
CBW75656.1
Transposase.
       0.737
aroE
Shikimate 5-dehydrogenase (EC 1.1.1.25); Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
 
 
    0.713
CBW75657.1
Unnamed protein product.
       0.514
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.