STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW75063.1Trp repressor binding protein; COG: Multimeric flavodoxin WrbA; Pfam: Flavodoxin::PF00258. (209 aa)    
Predicted Functional Partners:
CBW74731.1
Trp repressor binding protein; COG: Multimeric flavodoxin WrbA; Belongs to the WrbA family.
  
  
 
0.916
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase ubiE (EC 2.1.1.-); Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
     
  0.900
CBW75062.1
Transporter; COG: Predicted membrane protein.
  
    0.601
CBW75064.1
SnoaL-like domain-containing protein; Unnamed protein product.
       0.429
CBW75061.1
Transcriptional regulators, LysR family; COG: Transcriptional regulator; Pfam: Bacterial regulatory helix-turn-helix protein, lysR family::PF00126<br>LysR substrate binding domain::PF03466.
       0.425
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.