STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW76302.1Permease; COG: Predicted membrane protein; Pfam: Protein of unknown function (DUF979)::PF06166. (318 aa)    
Predicted Functional Partners:
CBW76301.1
Permease; COG: Predicted membrane protein; Pfam: Protein of unknown function (DUF969)::PF06149.
 
    0.977
pxpA
Lactam utilization protein LAMB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
    0.823
pcp
Pyrrolidone-carboxylate peptidase (EC 3.4.19.3); Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family.
 
    0.797
CBW76299.1
Regulator of kinase autophosphorylation inhibitor; COG: Allophanate hydrolase subunit 2; Pfam: Allophanate hydrolase subunit 2::PF02626.
  
    0.646
CBW76298.1
Kinase autophosphorylation inhibitor kipI; COG: Allophanate hydrolase subunit 1; Pfam: Allophanate hydrolase subunit 1::PF02682.
  
    0.556
CBW75613.1
Citrate synthase (EC 2.3.3.1); COG: Citrate synthase; Pfam: Citrate synthase::PF00285; Belongs to the citrate synthase family.
   
    0.540
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.