STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW73565.1Type I secretion outer membrane protein; COG: Outer membrane protein; Pfam: Outer membrane efflux protein::PF02321. (478 aa)    
Predicted Functional Partners:
macB
Macrolide-specific ABC-type efflux carrier; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 0.988
CBW73567.1
Macrolide-specific efflux protein macA; COG: Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.967
CBW75921.1
Acriflavin resistance plasma membrane protein; COG: Cation/multidrug efflux pump; Pfam: AcrB/AcrD/AcrF family::PF00873.
 
 0.908
CBW75922.1
Acriflavin resistance periplasmic protein; COG: Membrane-fusion protein; Pfam: HlyD family secretion protein::PF00529; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.803
CBW74972.1
Multidrug resistance protein A; COG: Multidrug resistance efflux pump; Pfam: HlyD family secretion protein::PF00529.
 
 0.759
CBW75522.1
Acriflavin resistance plasma membrane protein; COG: Cation/multidrug efflux pump; Pfam: AcrB/AcrD/AcrF family::PF00873; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.652
CBW75521.1
Acriflavin resistance periplasmic protein; COG: Membrane-fusion protein; Pfam: HlyD family secretion protein::PF00529; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.605
CBW75523.1
Acriflavin resistance plasma membrane protein; COG: Cation/multidrug efflux pump; Pfam: AcrB/AcrD/AcrF family::PF00873; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.571
CBW74724.1
Fusaric acid resistance protein fusE; COG: Multidrug resistance efflux pump; Pfam: HlyD family secretion protein::PF00529; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.490
CBW73568.1
Transposase / Tylosin transcription regulator TylR; COG: FOG: Transposase.
       0.441
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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