STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW73541.1Methyltransferase (EC 2.1.1.-); COG: SAM-dependent methyltransferases; Pfam: Methyltransferase domain::PF08241<br>Methyltransferase domain::PF08242. (579 aa)    
Predicted Functional Partners:
CBW73540.1
Unnamed protein product; COG: Outer membrane receptor proteins, mostly Fe transport.
       0.773
CBW75576.1
Non-ribosomal peptide synthetase modules; COG: Non-ribosomal peptide synthetase modules and related proteins; Pfam: AMP-binding enzyme::PF00501<br>Condensation domain::PF00668<br>Phosphopantetheine attachment site::PF00550<br>Thioesterase domain::PF00975.
     
 0.572
CBW75453.1
Non-ribosomal peptide synthetase modules (EC 6.3.2.-); COG: Non-ribosomal peptide synthetase modules and related proteins; Pfam: AMP-binding enzyme::PF00501<br>Condensation domain::PF00668<br>Phosphopantetheine attachment site::PF00550.
     
 0.552
CBW73542.1
Unnamed protein product.
       0.542
rhiA
Modular polyketide synthase (EC 2.3.1.-); Rhizoxin biosynthesis.
     
 0.499
rhiF
RhiF; Modular polyketide synthase (EC 2.3.1.-); Rhizoxin biosynthesis.
  
  
 0.451
rhiE
Modular polyketide synthase (EC 2.3.1.-); Rhizoxin biosynthesis.
  
  
 0.451
rhiC
Modular polyketide synthase (EC 2.3.1.-); Rhizoxin biosynthesis.
  
  
 0.451
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.