STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW74734.1CBS domain containing protein; COG: FOG: CBS domain; Pfam: CBS domain pair::PF00571. (196 aa)    
Predicted Functional Partners:
CBW74733.1
Unnamed protein product.
       0.773
CBW73692.1
Unnamed protein product; COG: Phage-related protein.
  
 
 0.725
aroC
Chorismate synthase (EC 4.2.3.5); Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
       0.608
CBW74732.1
Ribonuclease BN (EC 3.1.-.-); COG: Predicted membrane protein; Pfam: Ribonuclease BN-like family::PF03631.
       0.550
CBW74730.1
Hypothetical protein; COG: Predicted membrane protein.
 
     0.548
CBW75500.1
Granule-associated protein; COG: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; Pfam: Phasin protein::PF09361.
  
     0.440
CBW74729.1
FAD/FMN-containing dehydrogenases; COG: FAD/FMN-containing dehydrogenases; Pfam: FAD linked oxidases, C-terminal domain::PF02913<br>FAD binding domain::PF01565.
       0.419
CBW74731.1
Trp repressor binding protein; COG: Multimeric flavodoxin WrbA; Belongs to the WrbA family.
       0.419
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.