STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW74008.1Hemolysin; COG: Large exoproteins involved in heme utilization or adhesion; Pfam: Haemagluttinin repeat::PF05594<br>haemagglutination activity domain::PF05860. (3002 aa)    
Predicted Functional Partners:
CBW74007.1
Hemolysin activator protein precursor; COG: Hemolysin activation/secretion protein; Pfam: Haemolysin secretion/activation protein ShlB/FhaC/HecB::PF03865<br>POTRA domain, ShlB-type::PF08479.
 
 0.913
CBW75272.1
Hemolysin activator protein precursor; COG: Hemolysin activation/secretion protein; Pfam: POTRA domain, ShlB-type::PF08479<br>Haemolysin secretion/activation protein ShlB/FhaC/HecB::PF03865.
 
 0.804
CBW74009.1
Unnamed protein product.
       0.773
CBW76148.1
Unnamed protein product; COG: Outer membrane protein; Pfam: Lipid A 3-O-deacylase (PagL)::PF09411.
  
     0.685
CBW73626.1
General secretion pathway protein H; COG: Type II secretory pathway, pseudopilin PulG.
  
     0.670
CBW76241.1
Acylamino-acid-releasing enzyme (EC 3.4.19.1); COG: Dienelactone hydrolase and related enzymes.
  
     0.662
CBW75545.1
Hypothetical protein; COG: Predicted membrane protein.
  
     0.608
CBW74988.1
Outer membrane protein; COG: Outer membrane protein V; Pfam: MltA-interacting protein MipA::PF06629.
  
     0.590
CBW73624.1
General secretion pathway protein J; COG: Type II secretory pathway, component PulJ; Pfam: Prokaryotic N-terminal methylation motif::PF07963.
  
     0.556
CBW76221.1
Unnamed protein product; COG: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
 
   0.555
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.