STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW75224.1Hypothetical protein; COG: Predicted Fe-S protein; Pfam: Protein of unknown function (DUF1289)::PF06945. (67 aa)    
Predicted Functional Partners:
CBW75500.1
Granule-associated protein; COG: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; Pfam: Phasin protein::PF09361.
  
     0.535
CBW74135.1
Hypothetical protein; COG: Outer membrane protein.
  
     0.525
CBW75041.1
Hypothetical protein; COG: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase.
  
     0.497
CBW74298.1
Rieske (2Fe-2S) domain protein; COG: Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases; Pfam: Rieske [2Fe-2S] domain::PF00355.
 
     0.444
CBW73905.1
Ribonuclease inhibitor barstar; COG: Uncharacterized protein conserved in bacteria.
  
    0.441
CBW74590.1
Heme export protein ResB; COG: ResB protein required for cytochrome c biosynthesis; Pfam: ResB-like family::PF05140.
  
     0.428
CBW75665.1
Hypothetical protein; COG: NTP pyrophosphohydrolases including oxidative damage repair enzymes.
  
     0.427
CBW74122.1
Hypothetical exported protein; COG: Predicted periplasmic/secreted protein; Pfam: Protein of unknown function (DUF541)::PF04402.
  
     0.425
CBW75223.1
Threonine dehydratase (EC 4.3.1.19); COG: Threonine dehydratase; Pfam: Pyridoxal-phosphate dependent enzyme::PF00291.
       0.414
CBW75222.1
Acetylornithine deacetylase (EC 3.5.1.16); COG: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; Pfam: Peptidase dimerisation domain::PF07687<br>Peptidase family M20/M25/M40::PF01546.
       0.414
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.