STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW74820.1Transposase; COG: Transposase and inactivated derivatives; Pfam: Integrase core domain::PF00665. (358 aa)    
Predicted Functional Partners:
CBW74819.1
Transposase; COG: DNA replication protein; Pfam: IstB-like ATP binding protein::PF01695.
  
 0.966
CBW75137.1
Transposase; COG: DNA replication protein; Pfam: IstB-like ATP binding protein::PF01695.
  
 0.856
CBW74821.1
Transposase.
       0.565
CBW74822.1
Transposase.
       0.511
CBW74817.1
Transposase.
       0.434
CBW74818.1
Transposase; COG: Transposase and inactivated derivatives; Pfam: IS66 Orf2 like protein::PF05717.
       0.434
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.