STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW75500.1Granule-associated protein; COG: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; Pfam: Phasin protein::PF09361. (188 aa)    
Predicted Functional Partners:
CBW75505.1
Sensor protein fixL (EC 2.7.3.-); COG: FOG: PAS/PAC domain; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase::PF02518<br>His Kinase A (phosphoacceptor) domain::PF00512<br>PAS fold::PF00989<br>PAS fold::PF08447<br>PAS fold::PF08448.
  
     0.769
CBW76217.1
Hypothetical protein.
  
     0.757
CBW74730.1
Hypothetical protein; COG: Predicted membrane protein.
  
     0.742
CBW74895.1
Methyl-accepting chemotaxis protein; COG: Uncharacterized protein conserved in bacteria; Pfam: PHB accumulation regulatory domain::PF05233<br>PHB/PHA accumulation regulator DNA-binding domain::PF07879.
 
   
 0.729
CBW75938.1
Branched-chain amino acid transport protein azlD; Pfam: Branched-chain amino acid transport protein (AzlD)::PF05437.
  
     0.723
CBW74421.1
Hypothetical protein; COG: Putative homoserine kinase type II (protein kinase fold).
  
     0.715
CBW73905.1
Ribonuclease inhibitor barstar; COG: Uncharacterized protein conserved in bacteria.
  
     0.705
CBW75829.1
Transglycosylase SLT family protein; COG: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); Pfam: Transglycosylase SLT domain::PF01464.
  
     0.693
CBW75015.1
Cell division protein zipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.686
CBW76330.1
Hypothetical protein; COG: Uncharacterized protein conserved in bacteria.
  
     0.657
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.