STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW75399.1Bacterioferritin; COG: Bacterioferritin (cytochrome b1); Pfam: Ferritin-like domain::PF00210; Belongs to the bacterioferritin family. (168 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase (EC 4.99.1.1); Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.929
CBW75401.1
Bacterioferritin-associated ferredoxin; Pfam: BFD-like [2Fe-2S] binding domain::PF04324.
  
 
 0.846
CBW75398.1
Fumarate hydratase (EC 4.2.1.2); Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
       0.545
CBW76169.1
Cytochrome c oxidase polypeptide II (EC 1.9.3.1); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
  
 0.482
CBW74763.1
Sensory transduction protein kinase (EC 2.7.3.-); COG: FOG: PAS/PAC domain; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase::PF02518<br>His Kinase A (phosphoacceptor) domain::PF00512<br>PAS fold::PF00989<br>PAS fold::PF08448<br>Response regulator receiver domain::PF00072.
   
  
 0.462
CBW74943.1
Limited host range virA protein (EC 2.7.3.-); COG: Signal transduction histidine kinase; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase::PF02518<br>Response regulator receiver domain::PF00072.
   
  
 0.451
CBW75397.1
Hypothetical membrane spanning protein; COG: Predicted membrane protein; Pfam: Uncharacterized protein family, UPF0114::PF03350.
       0.445
CBW75240.1
Unnamed protein product.
   
  
 0.428
CBW75400.1
Glutamate racemase (EC 5.1.1.3); Provides the (R)-glutamate required for cell wall biosynthesis.
       0.417
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.