STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW75402.1TonB protein; Pfam: Gram-negative bacterial tonB protein::PF03544. (261 aa)    
Predicted Functional Partners:
CBW75404.1
TolR protein; COG: Biopolymer transport protein; Pfam: Biopolymer transport protein ExbD/TolR::PF02472.
 
 
 0.923
CBW75403.1
TolQ protein; COG: Biopolymer transport proteins; Pfam: MotA/TolQ/ExbB proton channel family::PF01618.
 
 
 0.891
CBW74067.1
OUTER MEMBRANE PROTEIN NOSA PRECURSOR; COG: Outer membrane receptor proteins, mostly Fe transport; Pfam: TonB-dependent Receptor Plug Domain::PF07715<br>TonB dependent receptor::PF00593.
 
 
 0.765
CBW75556.1
TolR protein; COG: Biopolymer transport protein; Pfam: Biopolymer transport protein ExbD/TolR::PF02472.
  
 
 0.722
CBW74126.1
Vitamin B12 receptor; COG: Outer membrane cobalamin receptor protein; Pfam: TonB-dependent Receptor Plug Domain::PF07715<br>TonB dependent receptor::PF00593.
 
 
 
 0.681
CBW75401.1
Bacterioferritin-associated ferredoxin; Pfam: BFD-like [2Fe-2S] binding domain::PF04324.
  
  
 0.601
tolQ
TolQ protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.524
CBW76318.1
Hypothetical membrane spanning protein; COG: Uncharacterized protein conserved in bacteria.
  
    0.518
CBW75772.1
Spermidine synthase (EC 2.5.1.16); COG: Spermidine synthase.
  
     0.510
CBW75398.1
Fumarate hydratase (EC 4.2.1.2); Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.454
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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