STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D21TBC1 domain family member 21. (375 aa)    
Predicted Functional Partners:
RAB7B
RAB7B, member RAS oncogene family.
   
 0.852
RAB9A
RAB9A, member RAS oncogene family.
   
 0.826
RAB9B
RAB9B, member RAS oncogene family.
   
 0.826
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.694
GABARAPL1
GABA type A receptor associated protein like 1.
   
 0.694
ENSAOWP00000017931
annotation not available
   
 0.694
MAP1LC3A
Microtubule associated protein 1 light chain 3 alpha.
   
 0.694
ENSAOWP00000024887
annotation not available
   
 0.694
ENSAOWP00000027032
annotation not available
   
 0.694
ENSAOWP00000004681
annotation not available
    
 0.640
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.