STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TECPR1Tectonin beta-propeller repeat containing 1. (1206 aa)    
Predicted Functional Partners:
PDPK1
3-phosphoinositide dependent protein kinase 1.
    
 0.819
ENSAOWP00000018402
annotation not available
    
 0.731
RIPK4
Receptor interacting serine/threonine kinase 4.
    
  0.681
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
     
 0.625
CASK
Calcium/calmodulin dependent serine protein kinase.
    
  0.614
ENSAOWP00000019066
annotation not available
    
 0.600
MAP2K1
Mitogen-activated protein kinase kinase 1.
    
 0.600
MAP2K5
Mitogen-activated protein kinase kinase 5.
    
 0.600
RNASEL
Ribonuclease L.
   
  0.588
RAC1
Rac family small GTPase 1.
    
 0.559
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.