STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYO1HMyosin IH. (980 aa)    
Predicted Functional Partners:
ARID4A
AT-rich interaction domain 4A.
    
  0.828
ARID4B
AT-rich interaction domain 4B.
    
  0.828
WHRN
Whirlin.
    
 0.763
ANKS4B
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.741
USH1G
USH1 protein network component sans.
   
 0.741
USH1C
USH1 protein network component harmonin.
   
 0.709
MYL6
Myosin light chain 6.
    
 0.696
MYL2
Myosin light chain 2.
    
 0.631
ENSAOWP00000026090
annotation not available
    
 0.631
ENSAOWP00000001965
annotation not available
    
 0.605
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.