STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOWP00000001011annotation not available (358 aa)    
Predicted Functional Partners:
ENSAOWP00000006278
annotation not available
   
 0.962
SOX3
SRY-box transcription factor 3.
    
 0.958
SALL4
Spalt like transcription factor 4.
   
 0.940
CTNNB1
Catenin beta 1.
    
 0.860
SOX14
SRY-box transcription factor 14.
    
 0.837
SOX18
SRY-box transcription factor 18.
    
 0.790
PRDM14
PR/SET domain 14.
   
 0.759
WDR5B
WD repeat domain 5B.
    
 
 0.740
ENSAOWP00000018976
annotation not available
    
 0.737
SALL1
Spalt like transcription factor 1.
   
 0.734
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.