STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CACNB1Calcium voltage-gated channel auxiliary subunit beta 1. (414 aa)    
Predicted Functional Partners:
CACNG1
Calcium voltage-gated channel auxiliary subunit gamma 1.
   
 0.913
CACNA2D2
Calcium voltage-gated channel auxiliary subunit alpha2delta 2.
   
 0.844
CACNA2D1
Calcium voltage-gated channel auxiliary subunit alpha2delta 1.
   
 0.844
ENSAOWP00000010933
annotation not available
   
 0.820
CACNA2D4
Calcium voltage-gated channel auxiliary subunit alpha2delta 4.
   
 0.820
CACNA1B
Calcium voltage-gated channel subunit alpha1 B.
   
 0.818
CACNA1E
Calcium voltage-gated channel subunit alpha1 E.
   
 0.818
CATSPER2
Cation channel sperm associated 2.
   
 0.808
CATSPER3
Cation channel sperm associated 3.
   
 0.807
ENSAOWP00000013459
annotation not available
   
 0.802
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.