STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UHRF2Ubiquitin like with PHD and ring finger domains 2. (831 aa)    
Predicted Functional Partners:
DNMT1
DNA methyltransferase 1.
  
 0.909
ENSAOWP00000024784
annotation not available
   
 0.887
USP7
Ubiquitin specific peptidase 7.
    
 
 0.824
LIG1
DNA ligase 1.
   
 
 0.783
PCNA
Proliferating cell nuclear antigen.
   
   0.762
USP40
Ubiquitin specific peptidase 40.
    
 
 0.650
TNN
Tenascin N.
   
  0.611
EHMT1
Euchromatic histone lysine methyltransferase 1.
    
 0.578
TNC
Tenascin C.
    
  0.550
ENSAOWP00000015780
annotation not available
    
  0.550
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.