STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RETREG1Reticulophagy regulator 1. (359 aa)    
Predicted Functional Partners:
ENSAOWP00000007259
annotation not available
   
 0.984
ENSAOWP00000021457
annotation not available
   
 0.984
NMD3
NMD3 ribosome export adaptor.
   
 
 0.964
LSG1
Large 60S subunit nuclear export GTPase 1.
   
 0.963
RSL24D1
Ribosomal L24 domain containing 1.
   
 0.958
GNL2
G protein nucleolar 2.
   
 0.954
RPL23A
Ribosomal protein L23a.
   
 0.944
MRTO4
MRT4 homolog, ribosome maturation factor.
   
 0.933
GABARAPL1
GABA type A receptor associated protein like 1.
    
 
 0.932
GNL3
G protein nucleolar 3.
   
 0.931
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.